Sequencing by expansion (SBX): a white paper on a fast, flexible, and accurate single-molecule technology

SBX white paper highlights:

 

  • A novel sequencing approach: Sequencing by expansion (SBX) is a next-generation sequencing technology that uses a biochemical conversion process to encode the sequence of a target nucleic acid molecule into a more easily measurable surrogate polymer, called an Xpandomer. By expanding the space between high signal-to-noise nucleotide reporter codes to a length more than 50 times longer than the parent DNA molecule, Xpandomers enable accurate single-molecule sequencing.

  • High accuracy and speed: SBX delivers high accuracy and speed, with the ability to sequence seven human genomes in one hour and real-time base calling that can significantly reduce time from sample to data.

  • Flexibility: SBX technology’s versatility is demonstrated by its two distinct workflows—SBX-D (duplex) for high-accuracy applications and SBX-S (simplex) for ultra-high-throughput applications—that allow for tunable output and read lengths.


Data and content in this white paper are derived from the February 2025 “Introducing sequencing by expansion (SBX): a versatile,high-throughput single-molecule sequencing technology” webinar and 2025 AGBT conference presentation.

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The SBX technology and analysis tools are in development and not commercially available. The content of this material reflects current study results and/or design goals.