SeqCap IncRNA Probes have been discontinued. Our new KAPA Target Enrichment Portfolio is now available and contains our new KAPA HyperExome, as well as our new custom probes, KAPA HyperChoice and KAPA HyperExplore. For additional questions, please contact your regional sales representative.
Overview
SeqCap® lncRNA Enrichment Probes capture 17 Mb of long non-coding RNA (lncRNA) human targets (hg19 annotation), representing 32,808 lncRNA and TUCP (transcripts with unknown coding potential) lncRNA transcript isoforms and are available in 4, 48 and 384 reaction sizes
Long non-cdoing RNA is >200 nt, is quite abundant and has been reported to be associated with various diseases and biological processes.1,2,3,4,5 SeqCap lncRNA Probes Kitsare designed to selectively capture lncRNAs to enable targeted study of this common, but not well understood component of the human transcriptome. This allows you to investigate developmental regulation, tissue- and cell-type specificity, and the role of lncRNA in disease.
140529_HG19_lnc_RNA_primary_targets.bed: This file contains primary target intervals along with associated annotation IDs in BED format
140529_HG19_lnc_RNA_capture_targets.bed: This file contains capture target intervals along with associated annotation IDs in BED format. The coordinates listed here correspond to locations where capture probes were actually designed and placed
140529_HG19_lnc_RNA_coverage_summary.txt: This file contains information regarding the statistics of probe coverage and capture regions
ERCC_controls.bed: This file contains the ERCC controls in BED format
ERCC_controls.fa: This FASTA file contains the sequences of the ERCC controls
The BED files can be opened using SignalMap software
References
1. Wapinsky and Chang, Trends Cell Biol. 2011. Long noncoding RNAs and human disease.